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A

AbnormalTerminationException - Exception in org.aktin.scripting.r

Rscript process terminated abnormally (exit code !

AbnormalTerminationException(int, String) - Constructor for exception org.aktin.scripting.r.AbnormalTerminationException

C

convertStreamToString(InputStream) - Method in class org.aktin.scripting.r.RScript

G

getErrorOutput() - Method in exception org.aktin.scripting.r.AbnormalTerminationException

getExitCode() - Method in exception org.aktin.scripting.r.AbnormalTerminationException

Get the process' exit code.

getPackageVersions() - Method in class org.aktin.scripting.r.RScript

getVersion() - Method in class org.aktin.scripting.r.RScript

O

org.aktin.scripting.r - package org.aktin.scripting.r

R

RScript - Class in org.aktin.scripting.r

Takes data files from DataExtractor (patient, encounter, etc.) and runs an R script via the command Rscript.

RScript(Path) - Constructor for class org.aktin.scripting.r.RScript

runRscript(Path, String, Integer) - Method in class org.aktin.scripting.r.RScript

Run the Rscript executable.

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